Clearing dead cells can seed new viral infections while immune defenses remain intact
Viral genome redeploymentIn a restricted subset of older hosts, clearing dead cells could let their viral DNA start productive infection in previously uninfected cells.
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In a restricted subset of older hosts, enhanced efferocytosis converts otherwise noninfectious, corpse-associated viral chromatin into a new source of productive infection. Viral DNA retained in apoptotic material reaches recipient nuclei and becomes replication competent in permissive recipient cells. Consequently, early antimicrobial killing and corpse disposal improve while subsequent infectious output increases, even with preserved interferon responses and virus-specific cytotoxic function. The causal substrate is biologically reusable viral chromatin, rather than an immunosuppressive macrophage state. This hypothesis specifically predicts productive infection originating in previously uninfected recipients; it does not reinterpret genuine reactivation in established reservoirs as an artifact.
In lineage-resolved older-donor cultures, delayed infectious output originates from previously virus-negative recipient cells containing corpse-donor viral DNA, despite preserved protective-cell abundance and per-cell killing.
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Preventing biological reuse of corpse-derived DNA abolishes this output while preserving corpse uptake and its early clearance benefit. Merely preventing protective-cell engulfment does not abolish the effect. Viral DNA detection or isolated viral-gene expression without productive infection would fail the decisive prediction.
Enhanced engulfment removes still-functional protective cells and permits microbial rebound predicts instead: Live imaging shows protective cells with retained killing potential being engulfed before irreversible death, followed by a delayed decline in aggregate target killing and microbial rebound.
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Selectively preventing protective-cell engulfment preserves surveillance and eliminates rebound while matched corpse disposal and inflammatory withdrawal continue. At comparable cumulative uptake, changing the timing of engulfment changes the protective-cell trough and rebound according to an independently estimated delay-stability boundary. Recipient-derived viral output remains associated with established reservoirs, without the corpse-derived nuclear viral-DNA signature predicted by IH_Q_L3_M_G2_1_01.